Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Gm11618-201ENSMUST00000117946 267 ntBASIC12.73□□□□□ -0.37
Vrk1Q80X41 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Gm26927-201ENSMUST00000182385 965 ntBASIC12.73□□□□□ -0.37
Vrk1Q80X41 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.73□□□□□ -0.37
Vrk1Q80X41 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.73□□□□□ -0.37
Vrk1Q80X41 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.73□□□□□ -0.37
Vrk1Q80X41 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Snora73a-201ENSMUST00000082453 205 ntBASIC12.73□□□□□ -0.37
Vrk1Q80X41 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.73□□□□□ -0.37
Vrk1Q80X41 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.73□□□□□ -0.37
Vrk1Q80X41 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vrk1Q80X41 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vrk1Q80X41 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.72□□□□□ -0.37
Vrk1Q80X41 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Gm14723-201ENSMUST00000118686 215 ntBASIC12.72□□□□□ -0.37
Vrk1Q80X41 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Gm42627-201ENSMUST00000197347 224 ntBASIC12.72□□□□□ -0.37
Vrk1Q80X41 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.72□□□□□ -0.37
Vrk1Q80X41 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vrk1Q80X41 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vrk1Q80X41 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms