Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Gm8810-201ENSMUST00000172895 754 ntBASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Gm6007-201ENSMUST00000208170 823 ntBASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh8Q7TSK3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh8Q7TSK3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh8Q7TSK3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh8Q7TSK3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm5687-201ENSMUST00000118252 640 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Gm12403-201ENSMUST00000121384 959 ntBASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdh8Q7TSK3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms