Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gm11918-201ENSMUST00000121660 179 ntBASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gm27701-201ENSMUST00000184498 110 ntBASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gm38223-201ENSMUST00000194484 695 ntBASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gm42550-201ENSMUST00000201553 960 ntBASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.5□□□□□ -0.25
Casc4Q6P2L7 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Casc4Q6P2L7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm12490-201ENSMUST00000120255 560 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm12403-201ENSMUST00000121384 959 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm45384-201ENSMUST00000210451 277 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gm7653-201ENSMUST00000214567 508 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Casc4Q6P2L7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Casc4Q6P2L7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms