Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Gm5687-201ENSMUST00000118252 640 ntBASIC14.07□□□□□ -0.16
Scube3Q66PY1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Gm29107-201ENSMUST00000190910 347 ntBASIC14.07□□□□□ -0.16
Scube3Q66PY1 Gm38671-201ENSMUST00000200573 130 ntBASIC14.07□□□□□ -0.16
Scube3Q66PY1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 CT025561.1-201ENSMUST00000214972 674 ntBASIC14.07□□□□□ -0.16
Scube3Q66PY1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scube3Q66PY1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.06□□□□□ -0.16
Scube3Q66PY1 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.06□□□□□ -0.16
Scube3Q66PY1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scube3Q66PY1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Gm6152-201ENSMUST00000151704 340 ntBASIC14.06□□□□□ -0.16
Scube3Q66PY1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.06□□□□□ -0.16
Scube3Q66PY1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.06□□□□□ -0.16
Scube3Q66PY1 Gm17794-201ENSMUST00000220252 955 ntBASIC14.06□□□□□ -0.16
Scube3Q66PY1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.06□□□□□ -0.16
Scube3Q66PY1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.06□□□□□ -0.16
Scube3Q66PY1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scube3Q66PY1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.05□□□□□ -0.16
Scube3Q66PY1 Gm13612-201ENSMUST00000119276 390 ntBASIC14.05□□□□□ -0.16
Scube3Q66PY1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Scube3Q66PY1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms