Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Foxc1Q61572 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.98□□□□□ -0.81
Foxc1Q61572 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.98□□□□□ -0.81
Foxc1Q61572 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Foxc1Q61572 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Foxc1Q61572 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Foxc1Q61572 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm12091-201ENSMUST00000146791 830 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm10766-202ENSMUST00000194123 606 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm38384-201ENSMUST00000195413 1122 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm6745-201ENSMUST00000199216 526 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.97□□□□□ -0.81
Foxc1Q61572 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC9.97□□□□□ -0.81
Foxc1Q61572 AC132384.10-201ENSMUST00000217862 1204 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC9.97□□□□□ -0.81
Foxc1Q61572 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 AC154186.1-201ENSMUST00000227711 1597 ntBASIC9.97□□□□□ -0.81
Foxc1Q61572 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Foxc1Q61572 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Foxc1Q61572 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Foxc1Q61572 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.96□□□□□ -0.81
Foxc1Q61572 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Foxc1Q61572 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Foxc1Q61572 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms