Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Tsr1Q5SWD9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tsr1Q5SWD9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 AC154252.1-201ENSMUST00000226041 473 ntBASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsr1Q5SWD9 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm13823-201ENSMUST00000119930 345 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm29310-201ENSMUST00000185468 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21825-201ENSMUST00000185728 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm29109-201ENSMUST00000185895 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21896-201ENSMUST00000186520 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21873-201ENSMUST00000186728 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21794-201ENSMUST00000187056 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21880-201ENSMUST00000187275 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21826-201ENSMUST00000187451 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21198-201ENSMUST00000188393 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21749-201ENSMUST00000189343 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21901-201ENSMUST00000189568 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm29424-201ENSMUST00000189716 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm28599-201ENSMUST00000189838 694 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21867-201ENSMUST00000189917 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm29269-201ENSMUST00000190087 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21722-201ENSMUST00000190153 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm28423-201ENSMUST00000190701 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21899-201ENSMUST00000190745 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21910-201ENSMUST00000191163 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21849-201ENSMUST00000191571 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm28678-201ENSMUST00000191593 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm20910-201ENSMUST00000193268 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm21871-201ENSMUST00000194621 696 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Gm43222-201ENSMUST00000199013 603 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 AC154616.1-201ENSMUST00000226995 804 ntBASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.44□□□□□ -0.1
Tsr1Q5SWD9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms