Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Gm16215-201ENSMUST00000161990 637 ntBASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Gm42612-201ENSMUST00000197986 623 ntBASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Gm43170-201ENSMUST00000199827 612 ntBASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brf2Q3UAW9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.55□□□□□ -0.4
Brf2Q3UAW9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brf2Q3UAW9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brf2Q3UAW9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.54□□□□□ -0.4
Brf2Q3UAW9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms