Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm24749-201ENSMUST00000157838 343 ntBASIC13.15□□□□□ -0.3
Col9a1Q05722 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm8738-201ENSMUST00000172606 329 ntBASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm7003-201ENSMUST00000195089 312 ntBASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.15□□□□□ -0.3
Col9a1Q05722 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.15□□□□□ -0.3
Col9a1Q05722 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col9a1Q05722 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col9a1Q05722 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col9a1Q05722 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Col9a1Q05722 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Mir744-201ENSMUST00000103261 100 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm24590-201ENSMUST00000116699 119 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm27427-201ENSMUST00000185134 193 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm5298-201ENSMUST00000201122 892 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm43952-201ENSMUST00000203765 751 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm45074-201ENSMUST00000209091 1240 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Col9a1Q05722 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm19163-201ENSMUST00000223313 780 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm26315-201ENSMUST00000083890 321 ntBASIC13.14□□□□□ -0.31
Col9a1Q05722 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Col9a1Q05722 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a1Q05722 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.13□□□□□ -0.31
Col9a1Q05722 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.13□□□□□ -0.31
Col9a1Q05722 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col9a1Q05722 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col9a1Q05722 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.13□□□□□ -0.31
Col9a1Q05722 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col9a1Q05722 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a1Q05722 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.13□□□□□ -0.31
Col9a1Q05722 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms