Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col6a2Q02788 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.31□□□□□ -0.28
Col6a2Q02788 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.31□□□□□ -0.28
Col6a2Q02788 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a2Q02788 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a2Q02788 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col6a2Q02788 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Col6a2Q02788 Gm14350-201ENSMUST00000116642 640 ntBASIC13.3□□□□□ -0.28
Col6a2Q02788 Gm14660-201ENSMUST00000119809 575 ntBASIC13.3□□□□□ -0.28
Col6a2Q02788 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
Col6a2Q02788 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col6a2Q02788 Gm27331-201ENSMUST00000183705 60 ntBASIC13.3□□□□□ -0.28
Col6a2Q02788 Gm43371-201ENSMUST00000202838 1031 ntBASIC13.3□□□□□ -0.28
Col6a2Q02788 Gm29705-201ENSMUST00000212598 474 ntBASIC13.3□□□□□ -0.28
Col6a2Q02788 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col6a2Q02788 Gm16372-201ENSMUST00000073088 450 ntBASIC13.3□□□□□ -0.28
Col6a2Q02788 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.3□□□□□ -0.28
Col6a2Q02788 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Col6a2Q02788 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a2Q02788 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.29□□□□□ -0.28
Col6a2Q02788 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.29□□□□□ -0.28
Col6a2Q02788 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a2Q02788 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col6a2Q02788 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Gm12957-201ENSMUST00000117835 377 ntBASIC13.29□□□□□ -0.28
Col6a2Q02788 Gm6447-201ENSMUST00000118905 835 ntBASIC13.29□□□□□ -0.28
Col6a2Q02788 Gm13369-201ENSMUST00000119442 987 ntBASIC13.29□□□□□ -0.28
Col6a2Q02788 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a2Q02788 Gm43818-201ENSMUST00000200605 466 ntBASIC13.29□□□□□ -0.28
Col6a2Q02788 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col6a2Q02788 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col6a2Q02788 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col6a2Q02788 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a2Q02788 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm12742-201ENSMUST00000117326 410 ntBASIC13.28□□□□□ -0.28
Col6a2Q02788 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms