Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lig3P97386 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lig3P97386 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lig3P97386 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lig3P97386 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lig3P97386 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lig3P97386 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lig3P97386 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lig3P97386 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lig3P97386 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lig3P97386 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lig3P97386 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Lig3P97386 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lig3P97386 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lig3P97386 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.58□□□□□ -0.08
Lig3P97386 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.58□□□□□ -0.08
Lig3P97386 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.58□□□□□ -0.08
Lig3P97386 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.58□□□□□ -0.08
Lig3P97386 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lig3P97386 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lig3P97386 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.57□□□□□ -0.08
Lig3P97386 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Lig3P97386 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Lig3P97386 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lig3P97386 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lig3P97386 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.57□□□□□ -0.08
Lig3P97386 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Lig3P97386 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.57□□□□□ -0.08
Lig3P97386 Mir3547-201ENSMUST00000175461 88 ntBASIC14.57□□□□□ -0.08
Lig3P97386 Gm29649-201ENSMUST00000185649 419 ntBASIC14.57□□□□□ -0.08
Lig3P97386 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.57□□□□□ -0.08
Lig3P97386 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lig3P97386 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lig3P97386 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.57□□□□□ -0.08
Lig3P97386 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lig3P97386 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.56□□□□□ -0.08
Lig3P97386 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.56□□□□□ -0.08
Lig3P97386 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lig3P97386 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.56□□□□□ -0.08
Lig3P97386 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lig3P97386 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.56□□□□□ -0.08
Lig3P97386 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.56□□□□□ -0.08
Lig3P97386 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Lig3P97386 Gm4804-201ENSMUST00000182234 999 ntBASIC14.56□□□□□ -0.08
Lig3P97386 Gm21470-201ENSMUST00000187680 696 ntBASIC14.56□□□□□ -0.08
Lig3P97386 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.56□□□□□ -0.08
Lig3P97386 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Gm5425-201ENSMUST00000214125 459 ntBASIC14.56□□□□□ -0.08
Lig3P97386 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.56□□□□□ -0.08
Lig3P97386 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.56□□□□□ -0.08
Lig3P97386 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.56□□□□□ -0.08
Lig3P97386 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.56□□□□□ -0.08
Lig3P97386 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms