Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.12□□□□□ -0.63
Pdlim4P70271 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.12□□□□□ -0.63
Pdlim4P70271 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm12341-201ENSMUST00000119724 503 ntBASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm18018-201ENSMUST00000198273 408 ntBASIC11.12□□□□□ -0.63
Pdlim4P70271 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm18307-201ENSMUST00000206864 949 ntBASIC11.12□□□□□ -0.63
Pdlim4P70271 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.12□□□□□ -0.63
Pdlim4P70271 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdlim4P70271 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Pdlim4P70271 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.11□□□□□ -0.63
Pdlim4P70271 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Gm12091-201ENSMUST00000146791 830 ntBASIC11.11□□□□□ -0.63
Pdlim4P70271 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Gm26464-201ENSMUST00000157094 305 ntBASIC11.11□□□□□ -0.63
Pdlim4P70271 Gm8515-201ENSMUST00000194852 576 ntBASIC11.11□□□□□ -0.63
Pdlim4P70271 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.11□□□□□ -0.63
Pdlim4P70271 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pdlim4P70271 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.11□□□□□ -0.63
Pdlim4P70271 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdlim4P70271 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms