Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Crnkl1P63154 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.19□□□□□ -0.3
Crnkl1P63154 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.19□□□□□ -0.3
Crnkl1P63154 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.19□□□□□ -0.3
Crnkl1P63154 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.19□□□□□ -0.3
Crnkl1P63154 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.19□□□□□ -0.3
Crnkl1P63154 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Crnkl1P63154 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.19□□□□□ -0.3
Crnkl1P63154 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.19□□□□□ -0.3
Crnkl1P63154 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Crnkl1P63154 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Crnkl1P63154 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.18□□□□□ -0.3
Crnkl1P63154 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.18□□□□□ -0.3
Crnkl1P63154 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.18□□□□□ -0.3
Crnkl1P63154 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.18□□□□□ -0.3
Crnkl1P63154 Gm24158-201ENSMUST00000175263 71 ntBASIC13.18□□□□□ -0.3
Crnkl1P63154 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.18□□□□□ -0.3
Crnkl1P63154 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crnkl1P63154 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.18□□□□□ -0.3
Crnkl1P63154 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Crnkl1P63154 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Gm25287-201ENSMUST00000103846 110 ntBASIC13.17□□□□□ -0.3
Crnkl1P63154 Gm22918-201ENSMUST00000103855 110 ntBASIC13.17□□□□□ -0.3
Crnkl1P63154 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Crnkl1P63154 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.17□□□□□ -0.3
Crnkl1P63154 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.17□□□□□ -0.3
Crnkl1P63154 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.17□□□□□ -0.3
Crnkl1P63154 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.17□□□□□ -0.3
Crnkl1P63154 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.17□□□□□ -0.3
Crnkl1P63154 Gm44608-201ENSMUST00000206827 855 ntBASIC13.17□□□□□ -0.3
Crnkl1P63154 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.17□□□□□ -0.3
Crnkl1P63154 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.17□□□□□ -0.3
Crnkl1P63154 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Crnkl1P63154 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crnkl1P63154 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms