Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.08□□□□□ -0.32
Lhx1P63006 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.08□□□□□ -0.32
Lhx1P63006 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lhx1P63006 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Lhx1P63006 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lhx1P63006 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.08□□□□□ -0.32
Lhx1P63006 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Lhx1P63006 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Lhx1P63006 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.08□□□□□ -0.32
Lhx1P63006 Mir7085-201ENSMUST00000184353 66 ntBASIC13.08□□□□□ -0.32
Lhx1P63006 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.08□□□□□ -0.32
Lhx1P63006 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.08□□□□□ -0.32
Lhx1P63006 Gm45841-201ENSMUST00000207700 164 ntBASIC13.08□□□□□ -0.32
Lhx1P63006 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.08□□□□□ -0.32
Lhx1P63006 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.08□□□□□ -0.32
Lhx1P63006 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.08□□□□□ -0.32
Lhx1P63006 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.08□□□□□ -0.32
Lhx1P63006 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.07□□□□□ -0.32
Lhx1P63006 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Lhx1P63006 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lhx1P63006 Gm14660-201ENSMUST00000119809 575 ntBASIC13.07□□□□□ -0.32
Lhx1P63006 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.07□□□□□ -0.32
Lhx1P63006 Snora78-201ENSMUST00000158630 128 ntBASIC13.07□□□□□ -0.32
Lhx1P63006 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx1P63006 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx1P63006 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.07□□□□□ -0.32
Lhx1P63006 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.07□□□□□ -0.32
Lhx1P63006 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.07□□□□□ -0.32
Lhx1P63006 Gm40466-201ENSMUST00000212174 422 ntBASIC13.07□□□□□ -0.32
Lhx1P63006 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.07□□□□□ -0.32
Lhx1P63006 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Lhx1P63006 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.07□□□□□ -0.32
Lhx1P63006 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Lhx1P63006 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.07□□□□□ -0.32
Lhx1P63006 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lhx1P63006 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.07□□□□□ -0.32
Lhx1P63006 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx1P63006 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lhx1P63006 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.06□□□□□ -0.32
Lhx1P63006 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.06□□□□□ -0.32
Lhx1P63006 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.06□□□□□ -0.32
Lhx1P63006 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.06□□□□□ -0.32
Lhx1P63006 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lhx1P63006 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.06□□□□□ -0.32
Lhx1P63006 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.06□□□□□ -0.32
Lhx1P63006 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lhx1P63006 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lhx1P63006 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.06□□□□□ -0.32
Lhx1P63006 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Lhx1P63006 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx1P63006 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms