Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Gm18049-201ENSMUST00000208909 581 ntBASIC11.85□□□□□ -0.51
Sf3b6P59708 Dupd1-202ENSMUST00000224735 548 ntBASIC11.85□□□□□ -0.51
Sf3b6P59708 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.85□□□□□ -0.51
Sf3b6P59708 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sf3b6P59708 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.84□□□□□ -0.51
Sf3b6P59708 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sf3b6P59708 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.84□□□□□ -0.51
Sf3b6P59708 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.84□□□□□ -0.51
Sf3b6P59708 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Sf3b6P59708 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.84□□□□□ -0.51
Sf3b6P59708 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.84□□□□□ -0.51
Sf3b6P59708 Gm44872-201ENSMUST00000207864 420 ntBASIC11.84□□□□□ -0.51
Sf3b6P59708 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.84□□□□□ -0.51
Sf3b6P59708 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sf3b6P59708 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.84□□□□□ -0.51
Sf3b6P59708 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3b6P59708 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.84□□□□□ -0.51
Sf3b6P59708 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sf3b6P59708 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gm13385-201ENSMUST00000121089 220 ntBASIC11.83□□□□□ -0.52
Sf3b6P59708 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.83□□□□□ -0.52
Sf3b6P59708 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gm9719-201ENSMUST00000162765 543 ntBASIC11.83□□□□□ -0.52
Sf3b6P59708 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gm29541-201ENSMUST00000191351 678 ntBASIC11.83□□□□□ -0.52
Sf3b6P59708 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.83□□□□□ -0.52
Sf3b6P59708 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gm16476-201ENSMUST00000221544 139 ntBASIC11.83□□□□□ -0.52
Sf3b6P59708 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.83□□□□□ -0.52
Sf3b6P59708 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.83□□□□□ -0.52
Sf3b6P59708 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3b6P59708 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms