Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.33□□□□□ -0.6
Hmga2P52927 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga2P52927 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga2P52927 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hmga2P52927 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hmga2P52927 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmga2P52927 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmga2P52927 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmga2P52927 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmga2P52927 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.32□□□□□ -0.6
Hmga2P52927 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmga2P52927 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.32□□□□□ -0.6
Hmga2P52927 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmga2P52927 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmga2P52927 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmga2P52927 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmga2P52927 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmga2P52927 Gm19931-201ENSMUST00000198920 368 ntBASIC11.32□□□□□ -0.6
Hmga2P52927 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Gm17330-201ENSMUST00000221047 165 ntBASIC11.32□□□□□ -0.6
Hmga2P52927 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmga2P52927 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmga2P52927 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmga2P52927 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmga2P52927 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmga2P52927 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.31□□□□□ -0.6
Hmga2P52927 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.31□□□□□ -0.6
Hmga2P52927 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.31□□□□□ -0.6
Hmga2P52927 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmga2P52927 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hmga2P52927 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Hmga2P52927 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.31□□□□□ -0.6
Hmga2P52927 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.31□□□□□ -0.6
Hmga2P52927 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Gm22065-201ENSMUST00000103753 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm22066-201ENSMUST00000103761 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm24932-201ENSMUST00000103763 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm24115-201ENSMUST00000103799 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm22190-201ENSMUST00000103827 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm22191-201ENSMUST00000103831 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm24721-201ENSMUST00000103849 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm28018-201ENSMUST00000103869 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm26399-201ENSMUST00000103937 110 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmga2P52927 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.31□□□□□ -0.6
Hmga2P52927 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
Hmga2P52927 Gm25948-201ENSMUST00000175334 112 ntBASIC11.31□□□□□ -0.6
Hmga2P52927 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.31□□□□□ -0.6
Hmga2P52927 Gm25349-201ENSMUST00000177728 110 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms