Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm4271-201ENSMUST00000174444 973 ntBASIC13.49□□□□□ -0.25
Lhx3P50481 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.49□□□□□ -0.25
Lhx3P50481 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.49□□□□□ -0.25
Lhx3P50481 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Lhx3P50481 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.49□□□□□ -0.25
Lhx3P50481 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Lhx3P50481 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Lhx3P50481 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Lhx3P50481 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lhx3P50481 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Lhx3P50481 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx3P50481 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lhx3P50481 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lhx3P50481 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Lhx3P50481 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Lhx3P50481 Gm11425-201ENSMUST00000119608 498 ntBASIC13.48□□□□□ -0.25
Lhx3P50481 Gm16177-201ENSMUST00000120728 718 ntBASIC13.48□□□□□ -0.25
Lhx3P50481 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.48□□□□□ -0.25
Lhx3P50481 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.48□□□□□ -0.25
Lhx3P50481 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.48□□□□□ -0.25
Lhx3P50481 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Gm9396-201ENSMUST00000076703 567 ntBASIC13.48□□□□□ -0.25
Lhx3P50481 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lhx3P50481 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lhx3P50481 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.48□□□□□ -0.25
Lhx3P50481 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.48□□□□□ -0.25
Lhx3P50481 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx3P50481 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Lhx3P50481 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lhx3P50481 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Mir874-201ENSMUST00000104769 76 ntBASIC13.47□□□□□ -0.25
Lhx3P50481 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.47□□□□□ -0.25
Lhx3P50481 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Lhx3P50481 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Gm28693-202ENSMUST00000190758 331 ntBASIC13.47□□□□□ -0.25
Lhx3P50481 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.47□□□□□ -0.25
Lhx3P50481 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.47□□□□□ -0.25
Lhx3P50481 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.47□□□□□ -0.25
Lhx3P50481 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx3P50481 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx3P50481 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lhx3P50481 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lhx3P50481 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms