Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Brca1P48754 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Gm12266-201ENSMUST00000120311 962 ntBASIC14.67□□□□□ -0.06
Brca1P48754 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Brca1P48754 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Brca1P48754 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Gm44651-201ENSMUST00000207343 372 ntBASIC14.67□□□□□ -0.06
Brca1P48754 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.67□□□□□ -0.06
Brca1P48754 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.67□□□□□ -0.06
Brca1P48754 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Gm10179-201ENSMUST00000086233 688 ntBASIC14.67□□□□□ -0.06
Brca1P48754 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Brca1P48754 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Brca1P48754 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Brca1P48754 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.67□□□□□ -0.06
Brca1P48754 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Brca1P48754 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.67□□□□□ -0.06
Brca1P48754 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.67□□□□□ -0.06
Brca1P48754 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Brca1P48754 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.66□□□□□ -0.06
Brca1P48754 Gm7003-201ENSMUST00000195089 312 ntBASIC14.66□□□□□ -0.06
Brca1P48754 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Gm5369-201ENSMUST00000217499 588 ntBASIC14.66□□□□□ -0.06
Brca1P48754 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Gm13611-201ENSMUST00000118269 318 ntBASIC14.66□□□□□ -0.06
Brca1P48754 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.66□□□□□ -0.06
Brca1P48754 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.66□□□□□ -0.06
Brca1P48754 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Gm6963-201ENSMUST00000147879 379 ntBASIC14.66□□□□□ -0.06
Brca1P48754 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.66□□□□□ -0.06
Brca1P48754 Gm19353-201ENSMUST00000184561 445 ntBASIC14.66□□□□□ -0.06
Brca1P48754 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.66□□□□□ -0.06
Brca1P48754 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.66□□□□□ -0.06
Brca1P48754 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.66□□□□□ -0.06
Brca1P48754 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brca1P48754 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.65□□□□□ -0.06
Brca1P48754 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Brca1P48754 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.65□□□□□ -0.06
Brca1P48754 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.65□□□□□ -0.06
Brca1P48754 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Brca1P48754 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.65□□□□□ -0.06
Brca1P48754 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Brca1P48754 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.65□□□□□ -0.06
Brca1P48754 Gm14665-201ENSMUST00000122294 557 ntBASIC14.65□□□□□ -0.06
Brca1P48754 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.65□□□□□ -0.06
Brca1P48754 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brca1P48754 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.65□□□□□ -0.06
Brca1P48754 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Brca1P48754 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.65□□□□□ -0.06
Brca1P48754 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Brca1P48754 Gzmn-202ENSMUST00000225535 989 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms