Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.7□□□□□ -0.54
GdnfP48540 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
GdnfP48540 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.7□□□□□ -0.54
GdnfP48540 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
GdnfP48540 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.7□□□□□ -0.54
GdnfP48540 Gm17837-201ENSMUST00000186435 985 ntBASIC11.7□□□□□ -0.54
GdnfP48540 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.7□□□□□ -0.54
GdnfP48540 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.7□□□□□ -0.54
GdnfP48540 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
GdnfP48540 Gm6916-202ENSMUST00000205523 195 ntBASIC11.7□□□□□ -0.54
GdnfP48540 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.7□□□□□ -0.54
GdnfP48540 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.7□□□□□ -0.54
GdnfP48540 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
GdnfP48540 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
GdnfP48540 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
GdnfP48540 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.7□□□□□ -0.54
GdnfP48540 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.69□□□□□ -0.54
GdnfP48540 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
GdnfP48540 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.69□□□□□ -0.54
GdnfP48540 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
GdnfP48540 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.69□□□□□ -0.54
GdnfP48540 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.69□□□□□ -0.54
GdnfP48540 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.69□□□□□ -0.54
GdnfP48540 AA543401-201ENSMUST00000164248 1269 ntBASIC11.69□□□□□ -0.54
GdnfP48540 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
GdnfP48540 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.69□□□□□ -0.54
GdnfP48540 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Pck2-205ENSMUST00000226352 2784 ntBASIC11.69□□□□□ -0.54
GdnfP48540 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
GdnfP48540 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
GdnfP48540 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
GdnfP48540 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GdnfP48540 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
GdnfP48540 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
GdnfP48540 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
GdnfP48540 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.68□□□□□ -0.54
GdnfP48540 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.68□□□□□ -0.54
GdnfP48540 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
GdnfP48540 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.68□□□□□ -0.54
GdnfP48540 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.68□□□□□ -0.54
GdnfP48540 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.68□□□□□ -0.54
GdnfP48540 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.68□□□□□ -0.54
GdnfP48540 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Gm25144-201ENSMUST00000179561 110 ntBASIC11.68□□□□□ -0.54
GdnfP48540 Gm25352-201ENSMUST00000179815 110 ntBASIC11.68□□□□□ -0.54
GdnfP48540 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.68□□□□□ -0.54
GdnfP48540 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms