Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.28□□□□□ -0.44
Sftpa1P35242 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sftpa1P35242 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sftpa1P35242 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sftpa1P35242 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sftpa1P35242 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sftpa1P35242 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.27□□□□□ -0.44
Sftpa1P35242 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sftpa1P35242 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Sftpa1P35242 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.27□□□□□ -0.44
Sftpa1P35242 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Gm11637-201ENSMUST00000120601 592 ntBASIC12.27□□□□□ -0.45
Sftpa1P35242 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Mir5120-201ENSMUST00000175020 78 ntBASIC12.27□□□□□ -0.45
Sftpa1P35242 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.27□□□□□ -0.45
Sftpa1P35242 Gm2260-201ENSMUST00000184965 657 ntBASIC12.27□□□□□ -0.45
Sftpa1P35242 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.27□□□□□ -0.45
Sftpa1P35242 Gm4768-201ENSMUST00000206199 686 ntBASIC12.27□□□□□ -0.45
Sftpa1P35242 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sftpa1P35242 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sftpa1P35242 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.26□□□□□ -0.45
Sftpa1P35242 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.26□□□□□ -0.45
Sftpa1P35242 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.26□□□□□ -0.45
Sftpa1P35242 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.26□□□□□ -0.45
Sftpa1P35242 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sftpa1P35242 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms