Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm22065-201ENSMUST00000103753 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm22066-201ENSMUST00000103761 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm24932-201ENSMUST00000103763 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm24115-201ENSMUST00000103799 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm22190-201ENSMUST00000103827 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm22191-201ENSMUST00000103831 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm24721-201ENSMUST00000103849 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm28018-201ENSMUST00000103869 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm26399-201ENSMUST00000103937 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm25349-201ENSMUST00000177728 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm23616-201ENSMUST00000177797 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm25871-201ENSMUST00000177816 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm24752-201ENSMUST00000178240 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm24496-201ENSMUST00000178287 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm25649-201ENSMUST00000178476 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm25548-201ENSMUST00000178681 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm23147-201ENSMUST00000178841 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm26095-201ENSMUST00000179270 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm22171-201ENSMUST00000179283 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm23936-201ENSMUST00000179354 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm22619-201ENSMUST00000179516 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm25255-201ENSMUST00000179579 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm24755-201ENSMUST00000179691 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm26506-201ENSMUST00000179692 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm25086-201ENSMUST00000179931 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm23243-201ENSMUST00000180047 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm24659-201ENSMUST00000180212 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm24169-201ENSMUST00000180244 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm23689-201ENSMUST00000180354 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm27359-201ENSMUST00000184153 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm27785-201ENSMUST00000184268 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm27466-201ENSMUST00000184396 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm27703-201ENSMUST00000184836 110 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm43125-201ENSMUST00000201724 730 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.47□□□□□ -0.57
Slc6a1P31648 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.46□□□□□ -0.57
Slc6a1P31648 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm24158-201ENSMUST00000175263 71 ntBASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm43474-201ENSMUST00000196415 774 ntBASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.46□□□□□ -0.57
Slc6a1P31648 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.46□□□□□ -0.57
Slc6a1P31648 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Slc6a1P31648 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Slc6a1P31648 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms