Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
BdnfP21237 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
BdnfP21237 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BdnfP21237 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BdnfP21237 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BdnfP21237 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Gm15393-201ENSMUST00000120499 219 ntBASIC12.81□□□□□ -0.36
BdnfP21237 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.81□□□□□ -0.36
BdnfP21237 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.81□□□□□ -0.36
BdnfP21237 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.81□□□□□ -0.36
BdnfP21237 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.81□□□□□ -0.36
BdnfP21237 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.81□□□□□ -0.36
BdnfP21237 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.81□□□□□ -0.36
BdnfP21237 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
BdnfP21237 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BdnfP21237 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.8□□□□□ -0.36
BdnfP21237 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.8□□□□□ -0.36
BdnfP21237 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Gm15678-201ENSMUST00000117573 960 ntBASIC12.8□□□□□ -0.36
BdnfP21237 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BdnfP21237 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Gm44344-201ENSMUST00000200287 129 ntBASIC12.8□□□□□ -0.36
BdnfP21237 Gm43703-201ENSMUST00000200523 763 ntBASIC12.8□□□□□ -0.36
BdnfP21237 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
BdnfP21237 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
BdnfP21237 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.8□□□□□ -0.36
BdnfP21237 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.8□□□□□ -0.36
BdnfP21237 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
BdnfP21237 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
BdnfP21237 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.8□□□□□ -0.36
BdnfP21237 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BdnfP21237 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
BdnfP21237 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
BdnfP21237 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BdnfP21237 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Gm13385-201ENSMUST00000121089 220 ntBASIC12.79□□□□□ -0.36
BdnfP21237 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BdnfP21237 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms