Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl1P12850 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl1P12850 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl1P12850 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.04□□□□□ -0.64
Cxcl1P12850 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl1P12850 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.04□□□□□ -0.64
Cxcl1P12850 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl1P12850 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.04□□□□□ -0.64
Cxcl1P12850 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cxcl1P12850 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Cxcl1P12850 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Gm15240-201ENSMUST00000118156 720 ntBASIC11.03□□□□□ -0.64
Cxcl1P12850 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Gm27772-201ENSMUST00000184900 187 ntBASIC11.03□□□□□ -0.64
Cxcl1P12850 Gm7774-201ENSMUST00000200064 533 ntBASIC11.03□□□□□ -0.64
Cxcl1P12850 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.03□□□□□ -0.64
Cxcl1P12850 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cxcl1P12850 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cxcl1P12850 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl1P12850 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl1P12850 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl1P12850 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl1P12850 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl1P12850 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cxcl1P12850 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cxcl1P12850 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.02□□□□□ -0.65
Cxcl1P12850 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.02□□□□□ -0.65
Cxcl1P12850 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Gm25144-201ENSMUST00000179561 110 ntBASIC11.02□□□□□ -0.65
Cxcl1P12850 Gm25352-201ENSMUST00000179815 110 ntBASIC11.02□□□□□ -0.65
Cxcl1P12850 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Gm17330-201ENSMUST00000221047 165 ntBASIC11.02□□□□□ -0.65
Cxcl1P12850 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.02□□□□□ -0.65
Cxcl1P12850 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.02□□□□□ -0.65
Cxcl1P12850 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Cxcl1P12850 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cxcl1P12850 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cxcl1P12850 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms