Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col4a2P08122 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.16□□□□□ -0.46
Col4a2P08122 Gm15547-201ENSMUST00000122152 333 ntBASIC12.16□□□□□ -0.46
Col4a2P08122 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a2P08122 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Col4a2P08122 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.16□□□□□ -0.46
Col4a2P08122 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.16□□□□□ -0.46
Col4a2P08122 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a2P08122 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.16□□□□□ -0.46
Col4a2P08122 Gm8099-201ENSMUST00000200510 742 ntBASIC12.16□□□□□ -0.46
Col4a2P08122 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a2P08122 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Col4a2P08122 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a2P08122 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.16□□□□□ -0.46
Col4a2P08122 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.16□□□□□ -0.46
Col4a2P08122 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a2P08122 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Col4a2P08122 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Col4a2P08122 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.15□□□□□ -0.46
Col4a2P08122 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.15□□□□□ -0.46
Col4a2P08122 Gm5950-201ENSMUST00000213337 772 ntBASIC12.15□□□□□ -0.46
Col4a2P08122 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.15□□□□□ -0.46
Col4a2P08122 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.15□□□□□ -0.46
Col4a2P08122 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Col4a2P08122 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a2P08122 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.15□□□□□ -0.47
Col4a2P08122 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a2P08122 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.15□□□□□ -0.47
Col4a2P08122 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a2P08122 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm12566-201ENSMUST00000121479 359 ntBASIC12.14□□□□□ -0.47
Col4a2P08122 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm25700-201ENSMUST00000177693 110 ntBASIC12.14□□□□□ -0.47
Col4a2P08122 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.14□□□□□ -0.47
Col4a2P08122 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm8385-201ENSMUST00000058999 643 ntBASIC12.14□□□□□ -0.47
Col4a2P08122 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Col4a2P08122 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Col4a2P08122 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Col4a2P08122 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.14□□□□□ -0.47
Col4a2P08122 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.14□□□□□ -0.47
Col4a2P08122 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col4a2P08122 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Col4a2P08122 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.14□□□□□ -0.47
Col4a2P08122 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.14□□□□□ -0.47
Col4a2P08122 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a2P08122 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms