Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
P04224 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
P04224 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
P04224 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
P04224 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Gm12260-201ENSMUST00000122447 411 ntBASIC11.69□□□□□ -0.54
P04224 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
P04224 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Gm11025-201ENSMUST00000140773 466 ntBASIC11.69□□□□□ -0.54
P04224 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Gm18737-201ENSMUST00000173594 937 ntBASIC11.69□□□□□ -0.54
P04224 Gm25927-201ENSMUST00000175058 117 ntBASIC11.69□□□□□ -0.54
P04224 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.69□□□□□ -0.54
P04224 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.69□□□□□ -0.54
P04224 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.69□□□□□ -0.54
P04224 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.69□□□□□ -0.54
P04224 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
P04224 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.68□□□□□ -0.54
P04224 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
P04224 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.68□□□□□ -0.54
P04224 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.68□□□□□ -0.54
P04224 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P04224 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.68□□□□□ -0.54
P04224 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.68□□□□□ -0.54
P04224 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.68□□□□□ -0.54
P04224 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Mir8117-201ENSMUST00000184773 107 ntBASIC11.68□□□□□ -0.54
P04224 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.68□□□□□ -0.54
P04224 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
P04224 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
P04224 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.68□□□□□ -0.54
P04224 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04224 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
P04224 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
P04224 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.67□□□□□ -0.54
P04224 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
P04224 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P04224 Gm15957-201ENSMUST00000118893 974 ntBASIC11.67□□□□□ -0.54
P04224 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
P04224 Gm1401-201ENSMUST00000122048 772 ntBASIC11.67□□□□□ -0.54
P04224 Mir3113-201ENSMUST00000175478 76 ntBASIC11.67□□□□□ -0.54
P04224 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.67□□□□□ -0.54
P04224 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms