Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Igh-VJ558P01758 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igh-VJ558P01758 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igh-VJ558P01758 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Igh-VJ558P01758 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igh-VJ558P01758 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.52□□□□□ -0.56
Igh-VJ558P01758 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Igh-VJ558P01758 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igh-VJ558P01758 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm12859-201ENSMUST00000117834 427 ntBASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm37917-201ENSMUST00000194711 392 ntBASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm19931-201ENSMUST00000198920 368 ntBASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gm6983-201ENSMUST00000214912 628 ntBASIC11.52□□□□□ -0.57
Igh-VJ558P01758 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Igh-VJ558P01758 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Mir6392-201ENSMUST00000184924 108 ntBASIC11.51□□□□□ -0.57
Igh-VJ558P01758 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Gm44397-201ENSMUST00000195950 113 ntBASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.51□□□□□ -0.57
Igh-VJ558P01758 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igh-VJ558P01758 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igh-VJ558P01758 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms