Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01643 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.58□□□□□ -0.72
P01643 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P01643 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01643 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01643 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P01643 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.58□□□□□ -0.72
P01643 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.58□□□□□ -0.72
P01643 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.58□□□□□ -0.72
P01643 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01643 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01643 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01643 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01643 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01643 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.57□□□□□ -0.72
P01643 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
P01643 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P01643 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
P01643 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.57□□□□□ -0.72
P01643 Gm8805-201ENSMUST00000117848 313 ntBASIC10.57□□□□□ -0.72
P01643 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.57□□□□□ -0.72
P01643 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.57□□□□□ -0.72
P01643 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.57□□□□□ -0.72
P01643 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.57□□□□□ -0.72
P01643 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
P01643 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.57□□□□□ -0.72
P01643 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P01643 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.57□□□□□ -0.72
P01643 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.57□□□□□ -0.72
P01643 Gm19184-201ENSMUST00000196798 928 ntBASIC10.57□□□□□ -0.72
P01643 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P01643 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.57□□□□□ -0.72
P01643 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.57□□□□□ -0.72
P01643 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.57□□□□□ -0.72
P01643 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.57□□□□□ -0.72
P01643 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P01643 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P01643 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P01643 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
P01643 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.57□□□□□ -0.72
P01643 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
P01643 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01643 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P01643 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
P01643 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.56□□□□□ -0.72
P01643 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.56□□□□□ -0.72
P01643 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.56□□□□□ -0.72
P01643 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.56□□□□□ -0.72
P01643 Gm26927-201ENSMUST00000182385 965 ntBASIC10.56□□□□□ -0.72
P01643 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01643 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
P01643 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms