Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.23■□□□□ 0.19
Mmp8O70138 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.22■□□□□ 0.19
Mmp8O70138 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.22■□□□□ 0.19
Mmp8O70138 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.22■□□□□ 0.19
Mmp8O70138 Gm27839-201ENSMUST00000184242 106 ntBASIC16.22■□□□□ 0.19
Mmp8O70138 Gm7561-201ENSMUST00000211203 886 ntBASIC16.22■□□□□ 0.19
Mmp8O70138 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.22■□□□□ 0.19
Mmp8O70138 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Mmp8O70138 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Mmp8O70138 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.22■□□□□ 0.19
Mmp8O70138 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.22■□□□□ 0.19
Mmp8O70138 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Mmp8O70138 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp8O70138 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.21■□□□□ 0.19
Mmp8O70138 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.21■□□□□ 0.19
Mmp8O70138 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Mmp8O70138 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.21■□□□□ 0.19
Mmp8O70138 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.21■□□□□ 0.19
Mmp8O70138 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Gm11618-201ENSMUST00000117946 267 ntBASIC16.21■□□□□ 0.19
Mmp8O70138 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.21■□□□□ 0.19
Mmp8O70138 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.21■□□□□ 0.19
Mmp8O70138 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Mmp8O70138 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.21■□□□□ 0.19
Mmp8O70138 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.21■□□□□ 0.19
Mmp8O70138 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Mmp8O70138 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.21■□□□□ 0.19
Mmp8O70138 Gm16372-201ENSMUST00000073088 450 ntBASIC16.21■□□□□ 0.19
Mmp8O70138 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Mmp8O70138 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.21■□□□□ 0.19
Mmp8O70138 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp8O70138 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Mmp8O70138 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.21■□□□□ 0.18
Mmp8O70138 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp8O70138 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp8O70138 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Mmp8O70138 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Mmp8O70138 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp8O70138 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mmp8O70138 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.2■□□□□ 0.18
Mmp8O70138 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.2■□□□□ 0.18
Mmp8O70138 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mmp8O70138 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.2■□□□□ 0.18
Mmp8O70138 Gm13123-201ENSMUST00000122173 492 ntBASIC16.2■□□□□ 0.18
Mmp8O70138 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Gm27486-201ENSMUST00000184923 80 ntBASIC16.2■□□□□ 0.18
Mmp8O70138 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.2■□□□□ 0.18
Mmp8O70138 Gm19931-201ENSMUST00000198920 368 ntBASIC16.2■□□□□ 0.18
Mmp8O70138 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.2■□□□□ 0.18
Mmp8O70138 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Mmp8O70138 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.2■□□□□ 0.18
Mmp8O70138 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mmp8O70138 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.2■□□□□ 0.18
Mmp8O70138 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms