Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.12□□□□□ -0.15
Itgb3O54890 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Itgb3O54890 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.12□□□□□ -0.15
Itgb3O54890 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Itgb3O54890 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Itgb3O54890 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Itgb3O54890 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Gm11618-201ENSMUST00000117946 267 ntBASIC14.11□□□□□ -0.15
Itgb3O54890 Gm13369-201ENSMUST00000119442 987 ntBASIC14.11□□□□□ -0.15
Itgb3O54890 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Itgb3O54890 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Itgb3O54890 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Itgb3O54890 Gm45784-201ENSMUST00000188360 142 ntBASIC14.11□□□□□ -0.15
Itgb3O54890 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.11□□□□□ -0.15
Itgb3O54890 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.11□□□□□ -0.15
Itgb3O54890 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Itgb3O54890 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.11□□□□□ -0.15
Itgb3O54890 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Itgb3O54890 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Itgb3O54890 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.11□□□□□ -0.15
Itgb3O54890 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Itgb3O54890 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.1□□□□□ -0.15
Itgb3O54890 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Itgb3O54890 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.1□□□□□ -0.15
Itgb3O54890 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.1□□□□□ -0.15
Itgb3O54890 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.1□□□□□ -0.15
Itgb3O54890 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.1□□□□□ -0.15
Itgb3O54890 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Gm27731-201ENSMUST00000185192 107 ntBASIC14.1□□□□□ -0.15
Itgb3O54890 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Itgb3O54890 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.1□□□□□ -0.15
Itgb3O54890 Gm37922-201ENSMUST00000195596 455 ntBASIC14.1□□□□□ -0.15
Itgb3O54890 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.1□□□□□ -0.15
Itgb3O54890 Gm40466-201ENSMUST00000212174 422 ntBASIC14.1□□□□□ -0.15
Itgb3O54890 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Itgb3O54890 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.1□□□□□ -0.15
Itgb3O54890 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Itgb3O54890 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Itgb3O54890 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Itgb3O54890 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Itgb3O54890 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms