Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim55G3X8Y1 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim55G3X8Y1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44357-201ENSMUST00000195897 142 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm19658-201ENSMUST00000196231 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44367-201ENSMUST00000196836 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44350-201ENSMUST00000197197 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm9682-201ENSMUST00000197505 556 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44390-201ENSMUST00000197533 144 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44313-201ENSMUST00000198018 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44486-201ENSMUST00000198508 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44314-201ENSMUST00000199263 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44394-201ENSMUST00000199558 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44484-201ENSMUST00000199873 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44466-201ENSMUST00000200264 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm44359-201ENSMUST00000200671 138 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms