Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Gm15487-201ENSMUST00000122373 465 ntBASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Gm27838-201ENSMUST00000184829 128 ntBASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh9F8VPK8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Gm12485-201ENSMUST00000119641 291 ntBASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh9F8VPK8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms