Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc149F6V035 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.52□□□□□ -0.25
Ccdc149F6V035 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc149F6V035 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Ccdc149F6V035 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc149F6V035 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc149F6V035 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc149F6V035 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.51□□□□□ -0.25
Ccdc149F6V035 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.51□□□□□ -0.25
Ccdc149F6V035 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc149F6V035 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Gm8805-201ENSMUST00000117848 313 ntBASIC13.5□□□□□ -0.25
Ccdc149F6V035 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Gm7029-201ENSMUST00000173226 450 ntBASIC13.5□□□□□ -0.25
Ccdc149F6V035 Gm25927-201ENSMUST00000175058 117 ntBASIC13.5□□□□□ -0.25
Ccdc149F6V035 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.5□□□□□ -0.25
Ccdc149F6V035 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.5□□□□□ -0.25
Ccdc149F6V035 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.5□□□□□ -0.25
Ccdc149F6V035 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.5□□□□□ -0.25
Ccdc149F6V035 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.5□□□□□ -0.25
Ccdc149F6V035 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc149F6V035 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc149F6V035 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms