Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm27772-201ENSMUST00000184900 187 ntBASIC12.98□□□□□ -0.33
Clip3B9EHT4 Mir7654-201ENSMUST00000185082 70 ntBASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm19078-201ENSMUST00000206311 727 ntBASIC12.98□□□□□ -0.33
Clip3B9EHT4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.98□□□□□ -0.33
Clip3B9EHT4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clip3B9EHT4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Gm15678-201ENSMUST00000117573 960 ntBASIC12.97□□□□□ -0.33
Clip3B9EHT4 Gm11524-201ENSMUST00000119349 807 ntBASIC12.97□□□□□ -0.33
Clip3B9EHT4 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.97□□□□□ -0.33
Clip3B9EHT4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Gm43438-201ENSMUST00000198133 379 ntBASIC12.97□□□□□ -0.33
Clip3B9EHT4 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.97□□□□□ -0.33
Clip3B9EHT4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clip3B9EHT4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Gm15376-201ENSMUST00000122258 783 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 Gm8602-201ENSMUST00000184045 607 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 Gm27701-201ENSMUST00000184498 110 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip3B9EHT4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.96□□□□□ -0.33
Clip3B9EHT4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms