Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Gm28659-201ENSMUST00000188013 759 ntBASIC10.76□□□□□ -0.69
Gm12887B1AVM1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Matn2-203ENSMUST00000226766 3252 ntBASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Gm12887B1AVM1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Gm1401-201ENSMUST00000122048 772 ntBASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Gm12887B1AVM1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms