Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav12d-1A0N8R0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Gm3436-201ENSMUST00000179930 840 ntBASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Gm18905-201ENSMUST00000205454 928 ntBASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Gm5779-201ENSMUST00000218467 910 ntBASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav12d-1A0N8R0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Gm19931-201ENSMUST00000198920 368 ntBASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Gm7774-201ENSMUST00000200064 533 ntBASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms