Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm13453-201ENSMUST00000118708 357 ntBASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm27618-201ENSMUST00000183671 60 ntBASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm27772-201ENSMUST00000184900 187 ntBASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.04□□□□□ -0.48
H2afb3S4R1G7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Gm27321-201ENSMUST00000185021 205 ntBASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Gm18905-201ENSMUST00000205454 928 ntBASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.03□□□□□ -0.48
H2afb3S4R1G7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
H2afb3S4R1G7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb3S4R1G7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
H2afb3S4R1G7 Gm43703-201ENSMUST00000200523 763 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms