Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Gm40466-201ENSMUST00000212174 422 ntBASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Gm10478-201ENSMUST00000084451 396 ntBASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx9Q9WUH2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Gm43818-201ENSMUST00000200605 466 ntBASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lhx9Q9WUH2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Gm12384-201ENSMUST00000119228 919 ntBASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Mir6420-201ENSMUST00000185032 102 ntBASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Gm42693-201ENSMUST00000196779 631 ntBASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Itm2b-204ENSMUST00000228637 783 ntBASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lhx9Q9WUH2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms