Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40aQ9R1C7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40aQ9R1C7 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.71□□□□□ -0.06
Prpf40aQ9R1C7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40aQ9R1C7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40aQ9R1C7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40aQ9R1C7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Gm43930-201ENSMUST00000203868 845 ntBASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40aQ9R1C7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Gm26464-201ENSMUST00000157094 305 ntBASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Gm37102-201ENSMUST00000195740 1105 ntBASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Gm2594-201ENSMUST00000214774 742 ntBASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Thoc7-209ENSMUST00000225325 765 ntBASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Gm24447-201ENSMUST00000083977 338 ntBASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf40aQ9R1C7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf40aQ9R1C7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms