Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh17Q9R100 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Cdh17Q9R100 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cdh17Q9R100 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.02□□□□□ -0.32
Cdh17Q9R100 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh17Q9R100 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh17Q9R100 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh17Q9R100 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh17Q9R100 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Cdh17Q9R100 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.02□□□□□ -0.33
Cdh17Q9R100 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.02□□□□□ -0.33
Cdh17Q9R100 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh17Q9R100 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm15376-201ENSMUST00000122258 783 ntBASIC13.01□□□□□ -0.33
Cdh17Q9R100 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm15487-201ENSMUST00000122373 465 ntBASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm26464-201ENSMUST00000157094 305 ntBASIC13.01□□□□□ -0.33
Cdh17Q9R100 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm43094-201ENSMUST00000196549 921 ntBASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh17Q9R100 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh17Q9R100 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13□□□□□ -0.33
Cdh17Q9R100 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13□□□□□ -0.33
Cdh17Q9R100 Gm29608-201ENSMUST00000190444 463 ntBASIC13□□□□□ -0.33
Cdh17Q9R100 Gm29667-201ENSMUST00000190817 490 ntBASIC13□□□□□ -0.33
Cdh17Q9R100 Gm38144-201ENSMUST00000192790 465 ntBASIC13□□□□□ -0.33
Cdh17Q9R100 Gm5279-201ENSMUST00000199575 745 ntBASIC13□□□□□ -0.33
Cdh17Q9R100 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13□□□□□ -0.33
Cdh17Q9R100 Gm20445-201ENSMUST00000061905 565 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms