Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.56■□□□□ 0.08
Scn11aQ9R053 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Gm14277-201ENSMUST00000121195 360 ntBASIC15.56■□□□□ 0.08
Scn11aQ9R053 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Gm16296-201ENSMUST00000159905 325 ntBASIC15.56■□□□□ 0.08
Scn11aQ9R053 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.56■□□□□ 0.08
Scn11aQ9R053 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.55■□□□□ 0.08
Scn11aQ9R053 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Gm14017-201ENSMUST00000121934 386 ntBASIC15.55■□□□□ 0.08
Scn11aQ9R053 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Gm42997-202ENSMUST00000200321 985 ntBASIC15.55■□□□□ 0.08
Scn11aQ9R053 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.55■□□□□ 0.08
Scn11aQ9R053 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.55■□□□□ 0.08
Scn11aQ9R053 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.55■□□□□ 0.08
Scn11aQ9R053 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn11aQ9R053 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.54■□□□□ 0.08
Scn11aQ9R053 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.54■□□□□ 0.08
Scn11aQ9R053 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm12502-201ENSMUST00000120197 444 ntBASIC15.54■□□□□ 0.08
Scn11aQ9R053 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Mir1943-201ENSMUST00000158276 73 ntBASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm8018-201ENSMUST00000173536 789 ntBASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm37201-201ENSMUST00000191845 523 ntBASIC15.54■□□□□ 0.08
Scn11aQ9R053 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.54■□□□□ 0.08
Scn11aQ9R053 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn11aQ9R053 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Mir874-201ENSMUST00000104769 76 ntBASIC15.53■□□□□ 0.08
Scn11aQ9R053 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms