Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SrfQ9JM73 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SrfQ9JM73 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.59□□□□□ -0.39
SrfQ9JM73 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
SrfQ9JM73 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Gm25026-201ENSMUST00000175017 188 ntBASIC12.59□□□□□ -0.39
SrfQ9JM73 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SrfQ9JM73 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SrfQ9JM73 Gm38170-201ENSMUST00000195404 816 ntBASIC12.59□□□□□ -0.39
SrfQ9JM73 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.59□□□□□ -0.39
SrfQ9JM73 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.59□□□□□ -0.39
SrfQ9JM73 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SrfQ9JM73 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SrfQ9JM73 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SrfQ9JM73 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.59□□□□□ -0.39
SrfQ9JM73 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.59□□□□□ -0.39
SrfQ9JM73 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SrfQ9JM73 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SrfQ9JM73 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SrfQ9JM73 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm24830-201ENSMUST00000102024 166 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm11978-201ENSMUST00000122315 466 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.58□□□□□ -0.4
SrfQ9JM73 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SrfQ9JM73 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm25890-201ENSMUST00000177643 165 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm22614-201ENSMUST00000178300 165 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.58□□□□□ -0.4
SrfQ9JM73 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm22042-201ENSMUST00000082989 165 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm26232-201ENSMUST00000083360 166 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm24136-201ENSMUST00000083374 165 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Gm26110-201ENSMUST00000083971 165 ntBASIC12.58□□□□□ -0.4
SrfQ9JM73 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.58□□□□□ -0.4
SrfQ9JM73 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SrfQ9JM73 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.58□□□□□ -0.4
SrfQ9JM73 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
SrfQ9JM73 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.57□□□□□ -0.4
SrfQ9JM73 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SrfQ9JM73 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SrfQ9JM73 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.57□□□□□ -0.4
SrfQ9JM73 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.57□□□□□ -0.4
SrfQ9JM73 Gm14017-201ENSMUST00000121934 386 ntBASIC12.57□□□□□ -0.4
SrfQ9JM73 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.57□□□□□ -0.4
SrfQ9JM73 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SrfQ9JM73 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms