Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Lime1Q9EQR5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Gm27430-201ENSMUST00000184585 107 ntBASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Gm38144-201ENSMUST00000192790 465 ntBASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Gm44333-201ENSMUST00000197168 107 ntBASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lime1Q9EQR5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.62□□□□□ -0.55
Lime1Q9EQR5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Gm9063-201ENSMUST00000223299 582 ntBASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lime1Q9EQR5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lime1Q9EQR5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lime1Q9EQR5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms