Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rrp8Q9DB85 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm6447-201ENSMUST00000118905 835 ntBASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm8227-201ENSMUST00000223306 571 ntBASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rrp8Q9DB85 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm4986-201ENSMUST00000119731 549 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm11591-201ENSMUST00000120063 702 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm13297-201ENSMUST00000120205 934 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm16479-201ENSMUST00000121706 932 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Mospd4-201ENSMUST00000180618 576 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm6621-201ENSMUST00000193251 772 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Gm19163-201ENSMUST00000223313 780 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rrp8Q9DB85 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.04□□□□□ -0.32
Rrp8Q9DB85 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms