Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Auts2-212ENSMUST00000178555 309 ntBASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Gm27437-201ENSMUST00000183429 107 ntBASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Gm43061-201ENSMUST00000198850 2241 ntBASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp4bQ9D8B3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Syt7-205ENSMUST00000224135 1557 ntBASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Gm18307-201ENSMUST00000206864 949 ntBASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.81■□□□□ 0.28
Chmp4bQ9D8B3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp4bQ9D8B3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Gm7488-201ENSMUST00000117148 684 ntBASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Gm12341-201ENSMUST00000119724 503 ntBASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms