Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 AA543401-201ENSMUST00000164248 1269 ntBASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Mir497b-201ENSMUST00000093601 125 ntBASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps33aQ9D2N9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps33aQ9D2N9 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms