Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Gm27397-201ENSMUST00000184997 107 ntBASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Syt7-205ENSMUST00000224135 1557 ntBASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim13Q9CYB0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Trim13Q9CYB0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Gm11745-201ENSMUST00000121669 448 ntBASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Gm27702-201ENSMUST00000184512 56 ntBASIC12.33□□□□□ -0.44
Trim13Q9CYB0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim13Q9CYB0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gm5566-201ENSMUST00000116118 459 ntBASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms