Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.82□□□□□ -0.36
Khdc3Q9CWU5 Syt7-205ENSMUST00000224135 1557 ntBASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gm19078-201ENSMUST00000206311 727 ntBASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc3Q9CWU5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gm11524-201ENSMUST00000119349 807 ntBASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gm15376-201ENSMUST00000122258 783 ntBASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Mir6977-201ENSMUST00000184960 64 ntBASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gm17330-201ENSMUST00000221047 165 ntBASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc3Q9CWU5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms