Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Gm13689-201ENSMUST00000119360 685 ntBASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gm12091-201ENSMUST00000146791 830 ntBASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gm29608-201ENSMUST00000190444 463 ntBASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gm8515-201ENSMUST00000194852 576 ntBASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa3Q9CQ71 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpa3Q9CQ71 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa3Q9CQ71 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa3Q9CQ71 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa3Q9CQ71 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.1□□□□□ -0.15
Rpa3Q9CQ71 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms