Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Rprl2-201ENSMUST00000157150 290 ntBASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Gm6916-202ENSMUST00000205523 195 ntBASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.05□□□□□ -0.48
Krt88Q9CPR6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krt88Q9CPR6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Krt88Q9CPR6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Gm5566-201ENSMUST00000116118 459 ntBASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Gm9719-201ENSMUST00000162765 543 ntBASIC12.03□□□□□ -0.48
Krt88Q9CPR6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Gm8927-201ENSMUST00000181978 981 ntBASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Gm3222-201ENSMUST00000071282 990 ntBASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms