Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gm43094-201ENSMUST00000196549 921 ntBASIC13.3□□□□□ -0.28
Trim33Q99PP7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.3□□□□□ -0.28
Trim33Q99PP7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.3□□□□□ -0.28
Trim33Q99PP7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.29□□□□□ -0.28
Trim33Q99PP7 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm15770-201ENSMUST00000117498 584 ntBASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm11524-201ENSMUST00000119349 807 ntBASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm19078-201ENSMUST00000206311 727 ntBASIC13.29□□□□□ -0.28
Trim33Q99PP7 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.29□□□□□ -0.28
Trim33Q99PP7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.29□□□□□ -0.28
Trim33Q99PP7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim33Q99PP7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gm12485-201ENSMUST00000119641 291 ntBASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gm15376-201ENSMUST00000122258 783 ntBASIC13.28□□□□□ -0.28
Trim33Q99PP7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gm37917-201ENSMUST00000194711 392 ntBASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.28□□□□□ -0.28
Trim33Q99PP7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.28□□□□□ -0.28
Trim33Q99PP7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms