Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Gm37008-201ENSMUST00000195712 319 ntBASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Gm16372-201ENSMUST00000073088 450 ntBASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Pcdhb18Q91Y02 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb18Q91Y02 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Grk6-205ENSMUST00000224653 2976 ntBASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gm9823-201ENSMUST00000051212 327 ntBASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Gm10268-201ENSMUST00000085340 555 ntBASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb18Q91Y02 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gm38002-201ENSMUST00000193255 180 ntBASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gm37922-201ENSMUST00000195596 455 ntBASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms